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代表性论文

  1. 1. Yingqi Wang* and Zhirong Liu*. Drift and Hall mobility of graphene-like Dirac materials. Phys. Rev. B 113 (20), 205408/1-16 (2026).

  2. 2. Sihan Wang* and Zhirong Liu*, Enhancing the efficiency of variational autoregressive networks through renormalization group. Phys. Rev. E 112 (3), 035310/1-13 (2025).

  3. 3. Pengbo Song, Qiaojing Huang, Wenyu Li, Maodong Li*, and Zhirong Liu*. Decomposition of forces in protein: Methodology and general properties. J. Chem. Inf. Model. 64, 7108 (2024).

  4. 4. Zhirong Liu*. Accelerating kinetics with time-reversal path sampling. Molecules 28 (24), 8147/1-12 (2023).

  5. 5. Xiaohui Wang, Bin Chong, Zhaoxi Sun, Hao Ruan, Yingguang Yang, Pengbo Song, and Zhirong Liu*. More is simpler: decomposition of ligand-binding affinity for proteins being disordered. Protein Sci. 31, e4375 (2022).

  6. 6. Bin Chong, Yingguang Yang, Zi-Le Wang, Han Xing, and Zhirong Liu*. Reinforcement learning to boost molecular docking upon protein conformational ensemble. Phys. Chem. Chem. Phys. 23, 6800 (2021).

  7. 7. Qiaojing Huang, Maodong Li, Luhua Lai*, and Zhirong Liu*. Allostery of multidomain proteins with disordered linkers. Curr. Opin. Struct. Biol. 62, 175 (2020).

  8. 8. Miao Yu, Yixin Chen, Zi-Le Wang, and Zhirong Liu*. Fluctuation correlations as major determinants of structure- and dynamics-driven allosteric effects. Phys. Chem. Chem. Phys. 21, 5200 (2019).

  9. 9. Zi-Le Wang, Zhi-Feng Huang*, and Zhirong Liu*. Elastic constants of stressed and unstressed materials in the phase field crystal model. Phys. Rev. B 97, 144112 (2018).

  10. 10. Ting Cheng, Haifeng Lang, Zhenzhu Li, Zhongfan Liu, and Zhirong Liu*. Anisotropic carrier mobility in two-dimensional materials with tilted Dirac cones: theory and application. Phys. Chem. Chem. Phys. 19, 23942 (2017).

  11. 11. Maodong Li and Zhirong Liu*. Dimensions, energetics and denaturant effects of protein unstructured state. Protein Sci. 25, 734 (2016).

  12. 12. Jinying Wang, Shibin Deng, Zhongfan Liu, and Zhirong Liu*. The rare two-dimensional materials with Dirac cones. Natl. Sci. Rev. 2 (1), 22-39 (2015).

  13. 13. Zhenzhu Li, Jinying Wang, and Zhirong Liu*. Intrinsic carrier mobility of Dirac cones: the limitations of deformation potential theory. J. Chem. Phys. 141 (14), 144107/1-9 (2014).

  14. 14. Fan Jin, Chen Yu, Luhua Lai*, and Zhirong Liu*. Ligand clouds around protein clouds: a scenario of ligand binding with intrinsically disordered proteins. PLoS Comput. Biol. 9 (10), e1003249/1-11 (2013).

  15. 15. Mingmei Yang, Lin Zhou, Jinying Wang, Zhongfan Liu*, and Zhirong Liu*. Evolutionary chlorination of graphene: from charge-transfer complex to covalent bonding and non-bonding. J. Phys. Chem. C 116 (1), 844-850 (2012).

  16. 16. Fangping Ouyang, Shenglin Peng, Zhongfan Liu*, and Zhirong Liu*. Bandgap opening in graphene antidot lattices: the missing half. ACS Nano 5 (5), 4023-4030 (2011).

  17. 17. Zhirong Liu, Lynn Zechiedrich, and Hue Sun Chan. Local site preference rationalizes disentangling by DNA topoisomerases. Phys. Rev. E. 81 (3), 031902/1-4 (2010).

  18. 18. Yongqi Huang and Zhirong Liu*. Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism. J. Mol. Biol. 393 (5), 1143-1159 (2009).